Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937237.1_cds_XP_016482571.1_73784
CDS Infomation

[gene=LOC107803383] [db_xref=GeneID:107803383] [protein=alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like] [protein_id=XP_016482571.1] [location=join(41576..41809,42553..42783,42991..43161,43599..43742,43831..44010,44206..44431,44886..44999,45090..45176,45332..45375)] [gbkey=CDS]
Sequence

ATGCAGAGGTTTGTAATAAGAAGAGCAAGATGGGTTGGAGAGGTACGAGGTGGATCACAA
CGTTGTTATTCTCAATTAGGCCTAGCATCCAAAAAGGACGATGATATGATCACACCTCGG
ATGCCTCACTTCGACTACTCTCCTCCGCCGTATGACGGGCCCACCGGCGATGAAATCATG
AACAAACGGAGAGAGTTTCTTAGCCCTTCCATGTTCTACTTCTATGAAAAACCGCTTAAT
CTGGTACACGGCAAGATGCAATACTTATATGACGACAATGGACGTAGATATGTTGATGCA
TTTGGAGGAATTGCAACTGTATCTTGTGGACACTGCCACCCTGATGTCGTAGAAGCAATC
ATAAATCAAACCAAACGCTTACAGCACTCCACCATCTTATACCTTAATCACACAATCACT
GATTTTGCTGAGGCACTTGCTTCTAAGTTGCCTGGTGATCTCAAGGTTGTGTTCTTTACT
AATTCTGGGACTGAAGCAAATGAGTTAGCAATGATGATGGCAAGACTATACACGGGTCGT
CATGATATCATCTCTCTTAGGAATGCTTACCATGGAAATGCAGCTGCCACTATGGGCACC
ACTGGGCAAAGCATATGGAAATTCAATGTAGTACAGAGTGGAGTGCATCATGCCATAAAC
CCTGACCCATACAGAGGAGTTTTTGGTTCTGATGGTGAGAAGTATGCGAAGGATGTTGAC
GATCTTATCCAATTTGGAACATCTGGAAAAGTTTCTGCTTTTATGTCTGAATCCATACAG
GGAGTTGGTGGAATAGTTGAATTGGCTCCAGGTTACTTGCCTGCTGTATACAACATTATA
CGAAAAGCGGGAGGTCTTTGTATCGCAGATGAAGTTCAAGCAGGATTTGCTCGCACTGGG
AGCAATTTCTGGGGATTTGAGAACCAAGAAGTGGTTCCTGACATAGTGACAATGGCAAAA
GGCATTGGAAATGGAATACCACTTGGGGCTGTAGTAACAACTCCTGAGATAGCACAAGTC
TTGACTCATCATAATTACTTCAACACATTTGGTGGAAACCCTGTGTGTACCGCTGCTGGA
CTTGCTGTTCTTAGAGTGATTGAAAAAGAAAAGCTTCAAGAAAATGCTCGTGTTGTTGGT
TCCTACTTGAAAGAGCGCCTTTTGGCTATCAAAGATAAGTATGAAATTGTTGGTGATGTG
AGGGGAAAAGGACTGATGCTTGGCGTTGAACTAGTTACTGACAGCGAACTGAAAACTCCT
GCAAGAGCTGAAACTCTGCATATCATGGACAAGATAAAAGATATGGGAGTATTAGTTGGC
AAGGGTGGATTCTATGGAAATGTCTTCAGAATTACACCTCCACTATGTTTCACTAAAGAA
GATGCAGATTTTCTAGCTGATGTCATGGATTGTGCACTGTCAAAGATATAA

Peptide Sequence

PEP ID

XP_016482571.1
PEP Infomation

PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like [Nicotiana tabacum]
Sequence

MQRFVIRRARWVGEVRGGSQRCYSQLGLASKKDDDMITPRMPHFDYSPPPYDGPTGDEIM
NKRREFLSPSMFYFYEKPLNLVHGKMQYLYDDNGRRYVDAFGGIATVSCGHCHPDVVEAI
INQTKRLQHSTILYLNHTITDFAEALASKLPGDLKVVFFTNSGTEANELAMMMARLYTGR
HDIISLRNAYHGNAAATMGTTGQSIWKFNVVQSGVHHAINPDPYRGVFGSDGEKYAKDVD
DLIQFGTSGKVSAFMSESIQGVGGIVELAPGYLPAVYNIIRKAGGLCIADEVQAGFARTG
SNFWGFENQEVVPDIVTMAKGIGNGIPLGAVVTTPEIAQVLTHHNYFNTFGGNPVCTAAG
LAVLRVIEKEKLQENARVVGSYLKERLLAIKDKYEIVGDVRGKGLMLGVELVTDSELKTP
ARAETLHIMDKIKDMGVLVGKGGFYGNVFRITPPLCFTKEDADFLADVMDCALSKI

Transcript Sequence

Gene sequence data has not been registered.